Basic Information
Locus ID:
gene:TRIDC3AG049630
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 589420983 | 589424360 | - | gene:TRIDC3AG049630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 86,362.91 Da | 46.80 | 103.17 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 529 | 793 | 9.74748E-92 | - |
| Pfam | PF13855 | Leucine rich repeat | 51 | 88 | 1.5E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 317 | 376 | 7.5E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 103 | 123 | 0.41 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 525 | 731 | 1.2E-40 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 150 | 172 | 0.72 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 211 | 2.38E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 201 | 402 | 6.6E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 527 | 790 | 3.78E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 600 | 804 | 3.1E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 75 | 3.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 520 | 599 | 2.3E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 76 | 217 | 4.4E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 221 | 412 | 9.8E-55 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 267 | 291 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 148 | 172 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 266 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 52 | 75 | 2.8 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 523 | 795 | 35.226887 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 529 | 552 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 339 | 352 | 2.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 55 | 68 | 2.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56370.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037409979.1 | probable LRR receptor-like serine/threonine-protein kinase IRK, partial [Triticum dicoccoides] | 0 |
| Q9LY03 | Probable LRR receptor-like serine/threonine-protein kinase IRK OS=Arabidopsis thaliana OX=3702 GN=IRK PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6ELJ3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG049630.