Basic Information
Locus ID:
gene:TRIDC3AG048090
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK17
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 575349266 | 575351958 | + | gene:TRIDC3AG048090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 54,117.83 Da | 38.35 | 81.73 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 444 | 492 | 5.26922E-9 | IPR002048 |
| CDD | cd00051 | EFh | 369 | 428 | 7.59424E-20 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 63 | 320 | 5.87668E-141 | - |
| Pfam | PF13405 | EF-hand domain | 441 | 467 | 1.1E-7 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 369 | 429 | 1.9E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 63 | 321 | 1.4E-74 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 49 | 347 | 1.15E-84 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 361 | 492 | 4.94E-40 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 149 | 329 | 3.1E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 339 | 492 | 2.6E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 64 | 148 | 1.2E-30 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 362 | 430 | 2.6E-51 | - |
| SMART | SM00054 | efh_1 | 368 | 396 | 7.0E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 63 | 321 | 7.0E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 440 | 468 | 8.6E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 404 | 432 | 5.9E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 400 | 435 | 12.616518 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 436 | 471 | 15.294476 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 364 | 399 | 14.457615 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 321 | 47.777878 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 449 | 461 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 377 | 389 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 183 | 195 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 413 | 425 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 69 | 96 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19360.1 | calcium-dependent protein kinase 34. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037407027.1 | calcium-dependent protein kinase 2 [Triticum dicoccoides] | 0 |
| Q5VQQ5 | Calcium-dependent protein kinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EJY9 | Calcium-dependent protein kinase 34 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG048090.