Basic Information
Locus ID:
gene:TRIDC3AG046890
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 567573078 | 567578079 | - | gene:TRIDC3AG046890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 55,115.38 Da | 49.23 | 95.01 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 20 | 61 | 5.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 72 | 4.84E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 55 | 357 | 1.88E-14 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 60 | 2.4E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 120 | 403 | 4.8E-12 | IPR032675 |
| SMART | SM00256 | fbox_2 | 24 | 64 | 0.0095 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 18 | 68 | 10.610234 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 477 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00315.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_037406947.1 | FBD-associated F-box protein At4g10400-like [Triticum dicoccoides] | 0 |
| Q3EAE5 | Putative F-box/FBD/LRR-repeat protein At4g00315 OS=Arabidopsis thaliana OX=3702 GN=At4g00315 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6EJP9 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG046890.