Basic Information
Locus ID:
gene:TRIDC3AG046640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Breast carcinoma amplified sequence 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 565529244 | 565535403 | - | gene:TRIDC3AG046640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 90,532.50 Da | 41.88 | 80.52 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12490 | Breast carcinoma amplified sequence 3 | 479 | 717 | 1.0E-72 | IPR022175 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 46 | 428 | 1.24E-16 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 310 | 474 | 1.5E-11 | IPR015943 |
| SMART | SM00320 | WD40_4 | 385 | 426 | 91.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 151 | 186 | 220.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 328 | 368 | 0.0017 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03380.1 | homolog of yeast autophagy 18 (ATG18) G. | 0 |
| RefSeq | XP_037406936.1 | autophagy-related protein 18f-like [Triticum dicoccoides] | 0 |
| Q8GUL1 | Autophagy-related protein 18g OS=Arabidopsis thaliana OX=3702 GN=ATG18G PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7PU85 | BCAS3 domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG046640.