Basic Information
Locus ID:
gene:TRIDC3AG046490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 564213644 | 564225900 | - | gene:TRIDC3AG046490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.22 | 91,127.79 Da | 33.18 | 85.07 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 32 | 153 | 2.2251E-25 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 340 | 430 | 5.15383E-27 | - |
| CDD | cd14066 | STKc_IRAK | 526 | 791 | 6.34691E-95 | - |
| Pfam | PF08276 | PAN-like domain | 344 | 415 | 1.9E-20 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 73 | 179 | 6.2E-29 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 521 | 789 | 3.2E-48 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 211 | 322 | 7.2E-32 | IPR000858 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 74 | 184 | 4.45E-21 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 503 | 792 | 1.62E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 596 | 799 | 9.7E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 494 | 595 | 3.1E-35 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 18 | 149 | 1.4E-15 | IPR036426 |
| SMART | SM00473 | ntp_6 | 346 | 429 | 7.5E-13 | IPR003609 |
| SMART | SM00108 | blect_4 | 30 | 153 | 4.3E-21 | IPR001480 |
| SMART | SM00220 | serkin_6 | 520 | 793 | 6.7E-29 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 1 | 839 | 3.6E-283 | IPR024171 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 344 | 430 | 10.63082 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 520 | 807 | 38.548378 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 24 | 151 | 16.455948 | IPR001480 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 289 | 325 | 9.164549 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 641 | 653 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 479 | 498 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 496 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037406920.1 | receptor-like serine/threonine-protein kinase SD1-8 isoform X2 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EJL4 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG046490.