Basic Information
Locus ID:
gene:TRIDC3AG046470
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 564154762 | 564157999 | + | gene:TRIDC3AG046470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 86,821.93 Da | 48.68 | 83.48 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 337 | 423 | 1.09848E-26 | - |
| CDD | cd00028 | B_lectin | 29 | 154 | 1.93254E-30 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 536 | 732 | 4.2E-47 | IPR001245 |
| Pfam | PF08276 | PAN-like domain | 341 | 408 | 2.3E-22 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 213 | 320 | 1.1E-23 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 73 | 179 | 1.1E-34 | IPR001480 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 518 | 734 | 2.02E-75 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 74 | 185 | 2.49E-27 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 508 | 608 | 7.5E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 609 | 767 | 5.5E-43 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 18 | 151 | 2.1E-20 | IPR036426 |
| SMART | SM00473 | ntp_6 | 342 | 422 | 2.4E-11 | IPR003609 |
| SMART | SM00108 | blect_4 | 29 | 154 | 8.2E-36 | IPR001480 |
| SMART | SM00220 | serkin_6 | 533 | 778 | 4.5E-24 | IPR000719 |
| PIRSF | PIRSF000641 | SRK | 2 | 773 | 2.1E-248 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 23 | 148 | 18.553099 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 341 | 423 | 10.711645 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 533 | 792 | 36.809895 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 654 | 666 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 509 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037406918.1 | receptor-like serine/threonine-protein kinase SD1-8 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EJK8 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG046470.