Basic Information
Locus ID:
gene:TRIDC3AG046190
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 562369791 | 562372762 | - | gene:TRIDC3AG046190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 67,446.27 Da | 39.71 | 89.75 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 197 | 484 | 5.4E-94 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 6 | 95 | 1.0E-5 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 3 | 95 | 1.26E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 2 | 125 | 3.5E-11 | IPR011333 |
| SMART | SM00225 | BTB_4 | 6 | 108 | 0.0025 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 197 | 508 | 92.417419 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 6 | 78 | 11.336782 | IPR000210 |
| Coils | Coil | Coil | 573 | 593 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_037406899.1 | BTB/POZ domain-containing protein At5g03250-like [Triticum dicoccoides] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EJL9 | BTB/POZ domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG046190.