Basic Information
Locus ID:
gene:TRIDC3AG045830
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 557432906 | 557436990 | - | gene:TRIDC3AG045830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 46,283.71 Da | 40.28 | 78.08 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 380 | 417 | 4.2E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 149 | 183 | 4.5E-10 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 109 | 418 | 8.37E-52 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 97 | 350 | 4.0E-36 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 352 | 422 | 9.4E-17 | IPR015943 |
| SMART | SM00320 | WD40_4 | 229 | 267 | 6.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 101 | 141 | 54.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 337 | 373 | 28.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 187 | 226 | 26.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 378 | 417 | 3.0E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 145 | 184 | 2.2E-10 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 385 | 422 | 13.415834 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 385 | 422 | 12.446495 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 152 | 193 | 15.888781 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 152 | 188 | 12.156496 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 171 | 185 | - | IPR019775 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16405.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037409926.1 | WD repeat-containing protein 13-like [Triticum dicoccoides] | 0 |
| Q9XSC3 | WD repeat-containing protein 44 OS=Bos taurus OX=9913 GN=WDR44 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7TYB8 | WD repeat-containing protein 13 OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG045830.