Basic Information
Locus ID:
gene:TRIDC3AG044940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 548504983 | 548522362 | + | gene:TRIDC3AG044940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 66,112.93 Da | 30.54 | 94.70 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 28 | 265 | 2.03028E-103 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 348 | 557 | 6.0E-46 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 27 | 276 | 3.7E-80 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 325 | 584 | 1.02E-71 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 28 | 284 | 1.03E-77 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 26 | 270 | 7.8E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 333 | 424 | 6.4E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 590 | 1.6E-45 | - |
| SMART | SM00220 | serkin_6 | 348 | 586 | 4.0E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 592 | 36.018391 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 470 | 482 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 354 | 378 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_040258571.1 | uncharacterized protein LOC109770509 [Aegilops tauschii subsp. strangulata] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | M7Z873 | L-type lectin-domain containing receptor kinase IV.1 OS=Triticum urartu OX=4572 GN=TRIUR3_20379 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG044940.