Basic Information
Locus ID:
gene:TRIDC3AG044830
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NPR1/NIM1 like defence protein C terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 548025257 | 548029459 | + | gene:TRIDC3AG044830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 66,370.69 Da | 49.84 | 85.58 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18310 | BTB_POZ_NPR_plant | 57 | 220 | 1.07437E-63 | - |
| Pfam | PF00651 | BTB/POZ domain | 74 | 169 | 2.1E-5 | IPR000210 |
| Pfam | PF13637 | Ankyrin repeats (many copies) | 329 | 371 | 3.8E-5 | - |
| Pfam | PF11900 | Domain of unknown function (DUF3420) | 255 | 302 | 9.9E-8 | IPR024228 |
| Pfam | PF12313 | NPR1/NIM1 like defence protein C terminal | 401 | 606 | 2.3E-82 | IPR021094 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 300 | 403 | 1.21E-15 | IPR036770 |
| SUPERFAMILY | SSF54695 | POZ domain | 55 | 218 | 2.67E-11 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 46 | 253 | 1.2E-19 | IPR011333 |
| Gene3D | G3DSA:1.25.40.20 | - | 282 | 443 | 7.9E-17 | IPR036770 |
| SMART | SM00248 | ANK_2a | 325 | 355 | 25.0 | IPR002110 |
| SMART | SM00225 | BTB_4 | 75 | 220 | 1.3E-8 | IPR000210 |
| SMART | SM00248 | ANK_2a | 359 | 388 | 0.16 | IPR002110 |
| SMART | SM00248 | ANK_2a | 296 | 324 | 1400.0 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 359 | 391 | 9.778029 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 359 | 384 | 9.489508 | - |
| ProSiteProfiles | PS50097 | BTB domain profile. | 75 | 170 | 13.094751 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19660.1 | NPR1-like protein 4. Encodes a ankyrin repeat BTB/POZ domain-containing protein with 36% sequence identity with NPR1. Mutants are more susceptible to the bacterial pathogen Pseudomonas syringe pv. tomato DC3000 and to the fungal pathogen Erysiphe cichoracearum, but do not differ markedly from wild type in interaction with virulent and avirulent strains of the oomycete Peronospora parasitica. NPR4 is required for basal defense against pathogens, and may be implicated in the cross-talk between the SA- and JA-dependent signaling pathways. | 0 |
| RefSeq | XP_037406780.1 | BTB/POZ domain and ankyrin repeat-containing protein NPR2-like [Triticum dicoccoides] | 0 |
| Q0JJ01 | BTB/POZ domain and ankyrin repeat-containing protein NPR2 OS=Oryza sativa subsp. japonica OX=39947 GN=NPR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EN05 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG044830.