Basic Information
Locus ID:
gene:TRIDC3AG042470
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
ElonginA binding-protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 523254246 | 523261778 | - | gene:TRIDC3AG042470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 142,818.70 Da | 45.20 | 72.21 | -0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 41 | 80 | 2.1E-7 | IPR001841 |
| Pfam | PF15870 | ElonginA binding-protein 1 | 824 | 930 | 3.3E-6 | IPR031736 |
| Pfam | PF00628 | PHD-finger | 156 | 194 | 1.8E-8 | IPR019787 |
| SUPERFAMILY | SSF57850 | RING/U-box | 33 | 88 | 9.03E-15 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 159 | 195 | 5.54E-11 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 27 | 99 | 1.0E-11 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 150 | 194 | 7.2E-11 | IPR013083 |
| SMART | SM00184 | ring_2 | 134 | 193 | 17.0 | IPR001841 |
| SMART | SM00249 | PHD_3 | 142 | 194 | 1.7E-7 | IPR001965 |
| SMART | SM00184 | ring_2 | 41 | 79 | 3.0E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 41 | 80 | 11.928664 | IPR001841 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 73 | 196 | 8.511 | IPR019787 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 57 | 66 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 940 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1192 | 1212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1051 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1127 | 1237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 724 | 753 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1223 | 1237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 990 | 1065 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1130 | 1158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 428 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 711 | 778 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 760 | 774 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 448 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10930.2 | - | 0 |
| RefSeq | XP_037406610.1 | uncharacterized protein At4g10930-like isoform X1 [Triticum dicoccoides] | 0 |
| Q8L7I1 | Uncharacterized protein At4g10930 OS=Arabidopsis thaliana OX=3702 GN=At4g10930 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EJG3 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG042470.