Basic Information
Locus ID:
gene:TRIDC3AG040420
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 507928275 | 507932828 | + | gene:TRIDC3AG040420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.00 | 45,945.30 Da | 74.10 | 58.25 | -0.77 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16486 | mRING-H2-C3H2C2D_ZSWM2 | 373 | 414 | 3.66146E-16 | - |
| Pfam | PF13639 | Ring finger domain | 373 | 414 | 1.5E-10 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 366 | 417 | 1.62E-18 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 337 | 417 | 6.4E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 373 | 413 | 2.6E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 373 | 414 | 12.740079 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 285 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04790.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037406450.1 | uncharacterized protein LOC119268843 [Triticum dicoccoides] | 0 |
| Q9SKK8 | RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6EM04 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG040420.