Basic Information
Locus ID:
gene:TRIDC3AG038940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 490446467 | 490449813 | + | gene:TRIDC3AG038940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 30,431.13 Da | 51.92 | 65.67 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 236 | 278 | 7.4E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 221 | 282 | 1.54E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 203 | 283 | 2.3E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 237 | 277 | 1.4E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 237 | 278 | 12.459772 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17970.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037406352.1 | E3 ubiquitin-protein ligase MBR1-like isoform X2 [Triticum dicoccoides] | 0 |
| O49500 | E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana OX=3702 GN=MBR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EIH2 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG038940.