Basic Information
Locus ID:
gene:TRIDC3AG038820
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 488865621 | 488869288 | - | gene:TRIDC3AG038820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 106,590.85 Da | 35.01 | 104.08 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 421 | 479 | 1.7E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 685 | 885 | 1.2E-42 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 7 | 67 | 4.3E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 356 | 408 | 2.2E-8 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 3 | 311 | 4.24E-64 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 229 | 584 | 3.84E-70 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 661 | 967 | 2.29E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 315 | 3.7E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 148 | 1.3E-45 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 757 | 979 | 6.1E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 316 | 620 | 7.0E-94 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 653 | 756 | 1.9E-25 | - |
| SMART | SM00365 | LRR_sd22_2 | 296 | 315 | 230.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 248 | 274 | 36.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 371 | 400 | 56.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 539 | 565 | 160.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 419 | 445 | 73.0 | - |
| SMART | SM00369 | LRR_typ_2 | 515 | 539 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 563 | 588 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 443 | 467 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 54 | 78 | 4.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 395 | 419 | 9.3 | IPR003591 |
| SMART | SM00220 | serkin_6 | 681 | 948 | 1.2E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 6 | 29 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 53.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 491 | 514 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 371 | 394 | 410.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 272 | 295 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 30 | 53 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 152 | 176 | 13.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 681 | 970 | 34.760464 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 801 | 813 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 687 | 709 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47580.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044976748.1 | LRR receptor-like serine/threonine-protein kinase EFR [Hordeum vulgare subsp. vulgare] | 0 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EHE0 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG038820.