Basic Information
Locus ID:
gene:TRIDC3AG038200
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 483558938 | 483567165 | - | gene:TRIDC3AG038200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 94,243.23 Da | 47.93 | 90.76 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 15 | 469 | 2.44E-18 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 397 | 481 | 9.9E-8 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 80 | 367 | 2.2E-10 | IPR015943 |
| SMART | SM00320 | WD40_4 | 422 | 461 | 0.12 | IPR001680 |
| SMART | SM00320 | WD40_4 | 306 | 352 | 1.5E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 71 | 118 | 27.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 3 | 40 | 360.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 313 | 352 | 9.138305 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49400.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037409836.1 | uncharacterized protein LOC119272453 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A0Q3HCD1 | TFIIIC_delta domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g55216v3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG038200.