Basic Information
Locus ID:
gene:TRIDC3AG038140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 482956985 | 482958920 | - | gene:TRIDC3AG038140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 31,831.67 Da | 47.25 | 90.86 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16474 | RING-H2_RNF111_like | 232 | 274 | 2.78573E-20 | - |
| Pfam | PF13639 | Ring finger domain | 232 | 274 | 5.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 225 | 277 | 2.15E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 192 | 278 | 4.9E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 233 | 273 | 1.6E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 233 | 274 | 12.341748 | IPR001841 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037406298.1 | E3 ubiquitin-protein ligase At4g11680-like [Triticum dicoccoides] | 0 |
| Q93Z92 | E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6EI84 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG038140.