Basic Information
Locus ID:
gene:TRIDC3AG037590
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 476978171 | 476985303 | - | gene:TRIDC3AG037590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 49,651.61 Da | 45.42 | 71.49 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 279 | 311 | 2.4E-4 | IPR001680 |
| Pfam | PF12265 | Histone-binding protein RBBP4 or subunit C of CAF1 complex | 8 | 73 | 1.6E-16 | IPR022052 |
| Pfam | PF00400 | WD domain, G-beta repeat | 230 | 266 | 0.064 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 321 | 360 | 3.5E-6 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 95 | 422 | 2.5E-44 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 438 | 9.4E-111 | IPR015943 |
| SMART | SM00320 | WD40_4 | 226 | 266 | 4.2E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 320 | 360 | 5.8E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 150 | 190 | 0.71 | IPR001680 |
| SMART | SM00320 | WD40_4 | 96 | 135 | 460.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 373 | 420 | 1.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 271 | 311 | 1.1E-6 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 278 | 311 | 11.711506 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 327 | 360 | 10.469233 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 278 | 311 | 9.783781 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 327 | 360 | 12.580379 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 233 | 275 | 10.374778 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 229 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19520.1 | Transducin family protein / WD-40 repeat family protein. Controls flowering. | 0 |
| RefSeq | XP_037406250.1 | WD-40 repeat-containing protein MSI4-like [Triticum dicoccoides] | 0 |
| O22607 | WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana OX=3702 GN=MSI4 PE=1 SV=3 | 0 | |
| TrEMBL | A0A068B052 | FVE OS=Triticum aestivum OX=4565 GN=FVE PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG037590.