Basic Information
Locus ID:
gene:TRIDC3AG035610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 452615687 | 452621918 | - | gene:TRIDC3AG035610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.69 | 16,563.88 Da | 43.09 | 72.31 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 3 | 142 | 2.45325E-75 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 5 | 141 | 6.5E-54 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 2 | 147 | 6.66E-67 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 147 | 2.9E-75 | IPR016135 |
| SMART | SM00212 | ubc_7 | 4 | 147 | 1.4E-78 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 147 | 61.091755 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 74 | 89 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
KEGG Pathway
Pathway:
ko04013 (MAPK signaling pathway - fly)
map04013 (MAPK signaling pathway - fly)
ko04120 (Ubiquitin mediated proteolysis)
map04120 (Ubiquitin mediated proteolysis)
ko04141 (Protein processing in endoplasmic reticulum)
map04141 (Protein processing in endoplasmic reticulum)
ko04624 (Toll and Imd signaling pathway)
map04624 (Toll and Imd signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27960.1 | ubiquitin conjugating enzyme 9. ubiquitin conjugating enzyme | 0 |
| RefSeq | XP_037406099.1 | ubiquitin-conjugating enzyme E2 5A [Triticum dicoccoides] | 0 |
| Q8S920 | Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp. japonica OX=39947 GN=UBC5A PE=2 SV=1 | 0 | |
| TrEMBL | A0A077RUR1 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 GN=TRAES_3BF051200060CFD_c1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG035610.