Basic Information
Locus ID:
gene:TRIDC3AG035380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 448832712 | 448848777 | - | gene:TRIDC3AG035380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 138,294.30 Da | 47.09 | 87.49 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 60 | 331 | 3.48E-22 | IPR036322 |
| Gene3D | G3DSA:1.25.40.470 | - | 842 | 1087 | 2.2E-26 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 55 | 290 | 7.6E-23 | IPR015943 |
| SMART | SM00320 | WD40_4 | 141 | 184 | 0.083 | IPR001680 |
| SMART | SM00320 | WD40_4 | 193 | 235 | 0.22 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 200 | 244 | 8.937796 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1206 | 1221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1255 | 1271 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1163 | 1296 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24710.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037406082.1 | uncharacterized protein LOC119268525 [Triticum dicoccoides] | 0 |
| Q54K14 | TSET complex member tstF OS=Dictyostelium discoideum OX=44689 GN=tstF PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EGR5 | Transducin/WD40 repeat-like superfamily protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG035380.