HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene:TRIDC3AG034390
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: Protein kinase domain
Maps and Mapping Data
Chromosome Start End Strand ID
3A 436854633 436857316 - gene:TRIDC3AG034390
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.54 56,277.37 Da 46.16 79.19 -0.19
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 197 465 1.01045E-100 -
Pfam PF07714 Protein tyrosine and serine/threonine kinase 194 462 1.5E-46 IPR001245
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 167 464 6.74E-81 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 267 472 1.3E-60 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 161 266 1.8E-33 -
SMART SM00220 serkin_6 191 447 6.8E-36 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 191 452 38.195026 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 311 323 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 197 219 - IPR017441
MobiDBLite mobidb-lite consensus disorder prediction 1 55 - -
MobiDBLite mobidb-lite consensus disorder prediction 67 86 - -
MobiDBLite mobidb-lite consensus disorder prediction 147 166 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G23540.1 Protein kinase superfamily protein. Encodes a member of the PERK family of putative receptor kinases. Overexpression leads to morphological defects and reduced fertility and increased expression of MAX genes. 0
RefSeq XP_037409785.1 proline-rich receptor-like protein kinase PERK12, partial [Triticum dicoccoides] 0
Swiss-Prot Q9ZUE0 Proline-rich receptor-like protein kinase PERK12 OS=Arabidopsis thaliana OX=3702 GN=PERK12 PE=2 SV=2 0
TrEMBL A0A3B6EKD3 Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC3AG034390.

Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.