Basic Information
Locus ID:
gene:TRIDC3AG033540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the WD repeat SEC13 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 426029051 | 426033680 | - | gene:TRIDC3AG033540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 35,312.41 Da | 49.18 | 85.17 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 267 | 302 | 0.0053 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 15 | 307 | 1.73E-29 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 13 | 319 | 8.2E-48 | IPR015943 |
| SMART | SM00320 | WD40_4 | 40 | 81 | 0.0025 | IPR001680 |
| SMART | SM00320 | WD40_4 | 2 | 38 | 1.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 264 | 303 | 8.7E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 207 | 252 | 450.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 91 | 132 | 90.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 271 | 303 | 9.309238 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 271 | 303 | 11.109979 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64350.1 | Transducin/WD40 repeat-like superfamily protein. seh1-like protein | 0 |
| RefSeq | XP_037405929.1 | protein SEH1-like [Triticum dicoccoides] | 0 |
| Q93VR9 | Protein SEH1 OS=Arabidopsis thaliana OX=3702 GN=SEH1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EK60 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG033540.