HalophFGD

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Basic Information
Locus ID: gene:TRIDC3AG032040
Species & Taxonomic ID: Triticum dicoccoides & 85692
Genome Assembly: GCF_002162155.2
Description: phosphatase 2A 55 kDa regulatory subunit B'
Maps and Mapping Data
Chromosome Start End Strand ID
3A 397248692 397255569 + gene:TRIDC3AG032040
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.17 54,282.18 Da 46.53 75.08 -0.47
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00400 WD domain, G-beta repeat 197 234 0.11 IPR001680
SUPERFAMILY SSF50978 WD40 repeat-like 25 478 1.18E-35 IPR036322
Gene3D G3DSA:2.130.10.10 - 22 164 2.2E-6 IPR015943
Gene3D G3DSA:2.130.10.10 - 184 483 1.7E-19 IPR015943
SMART SM00320 WD40_4 195 234 0.79 IPR001680
SMART SM00320 WD40_4 304 342 250.0 IPR001680
SMART SM00320 WD40_4 245 285 16.0 IPR001680
SMART SM00320 WD40_4 90 130 20.0 IPR001680
SMART SM00320 WD40_4 346 400 280.0 IPR001680
SMART SM00320 WD40_4 17 52 7.8 IPR001680
PIRSF PIRSF037309 PPA2_B55 1 486 9.4E-198 IPR000009
ProSitePatterns PS01024 Protein phosphatase 2A regulatory subunit PR55 signature 1. 90 104 - IPR018067
ProSitePatterns PS01025 Protein phosphatase 2A regulatory subunit PR55 signature 2. 204 218 - IPR018067
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 262 290 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 106 134 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 291 318 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 31 51 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 319 346 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 206 233 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 373 399 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 347 372 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 455 484 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 77 105 1.6E-157 IPR000009
PRINTS PR00600 Protein phosphatase PP2A 55kDa regulatory subunit signature 234 261 1.6E-157 IPR000009
Gene Ontology
Molecular Function:
GO:0005515 (protein binding) GO:0019888 (protein phosphatase regulator activity)
Cellular Component:
GO:0000159 (protein phosphatase type 2A complex)
KEGG Pathway
KO Term:
K04354 (serine/threonine-protein phosphatase 2A regulatory subunit B)
Pathway:
ko03015 (mRNA surveillance pathway) map03015 (mRNA surveillance pathway) ko04071 (Sphingolipid signaling pathway) map04071 (Sphingolipid signaling pathway) ko04111 (Cell cycle - yeast) map04111 (Cell cycle - yeast) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) ko04152 (AMPK signaling pathway) map04152 (AMPK signaling pathway) ko04390 (Hippo signaling pathway) map04390 (Hippo signaling pathway) ko04391 (Hippo signaling pathway - fly) map04391 (Hippo signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G17720.1 Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B 0
RefSeq XP_037405803.1 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 [Triticum dicoccoides] 0
Swiss-Prot A2X2K3 Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006296 PE=2 SV=2 0
TrEMBL A0A3B6EFY7 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Triticum aestivum OX=4565 PE=3 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC3AG032040.

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