Basic Information
Locus ID:
gene:TRIDC3AG026070
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E2 binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 228809022 | 228815295 | - | gene:TRIDC3AG026070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 49,924.91 Da | 38.83 | 92.75 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01488 | Uba3_RUB | 50 | 345 | 0.0 | - |
| Pfam | PF00899 | ThiF family | 49 | 341 | 5.0E-72 | IPR000594 |
| Pfam | PF08825 | E2 binding domain | 351 | 410 | 5.8E-20 | IPR014929 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 51 | 410 | 1.57E-102 | IPR035985 |
| Gene3D | G3DSA:1.10.10.520 | Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 | 213 | 286 | 2.5E-32 | IPR023318 |
| Gene3D | G3DSA:3.40.50.720 | - | 20 | 337 | 3.8E-73 | - |
| Gene3D | G3DSA:3.10.290.20 | - | 347 | 425 | 2.1E-14 | - |
| SMART | SM01181 | E2_bind_2 | 350 | 441 | 6.5E-32 | IPR014929 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 215 | 223 | - | IPR033127 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 442 | 455 | 7.7E-5 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 52 | 76 | 7.7E-5 | IPR000011 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19180.1 | E1 C-terminal related 1. Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein. | 0 |
| RefSeq | XP_037405343.1 | NEDD8-activating enzyme E1 catalytic subunit-like [Triticum dicoccoides] | 0 |
| O65041 | NEDD8-activating enzyme E1 catalytic subunit OS=Arabidopsis thaliana OX=3702 GN=ECR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6EEE4 | NEDD8-activating enzyme E1 catalytic subunit OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG026070.