Basic Information
Locus ID:
gene:TRIDC3AG025950
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBC20
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 227656571 | 227658529 | - | gene:TRIDC3AG025950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 18,462.65 Da | 50.33 | 86.61 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 45 | 152 | 5.57471E-51 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 47 | 153 | 2.6E-36 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 41 | 154 | 2.07E-43 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 37 | 165 | 1.1E-45 | IPR016135 |
| SMART | SM00212 | ubc_7 | 46 | 177 | 1.8E-34 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 43 | 177 | 39.00827 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 116 | 131 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50490.1 | ubiquitin-conjugating enzyme 20. Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells. | 0 |
| RefSeq | XP_037405337.1 | ubiquitin-conjugating enzyme E2 20-like [Triticum dicoccoides] | 0 |
| Q8L7T3 | Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453EQC3 | UBC core domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG025950.