Basic Information
Locus ID:
gene:TRIDC3AG025520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
26s proteasome non-ATPase regulatory subunit
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 219714712 | 219718291 | + | gene:TRIDC3AG025520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.00 | 34,269.07 Da | 40.96 | 92.64 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08069 | MPN_RPN11_CSN5 | 19 | 284 | 7.20925E-157 | - |
| Pfam | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 25 | 136 | 9.2E-33 | IPR000555 |
| Pfam | PF13012 | Maintenance of mitochondrial structure and function | 171 | 293 | 6.7E-14 | IPR024969 |
| SUPERFAMILY | SSF102712 | JAB1/MPN domain | 29 | 166 | 2.09E-19 | - |
| Gene3D | G3DSA:3.40.140.10 | Cytidine Deaminase, domain 2 | 16 | 232 | 5.5E-81 | - |
| SMART | SM00232 | pad1_6 | 28 | 163 | 4.0E-49 | IPR000555 |
| ProSiteProfiles | PS50249 | MPN domain profile. | 29 | 164 | 36.28302 | IPR037518 |
Gene Ontology
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23540.1 | Mov34/MPN/PAD-1 family protein. | 0 |
| RefSeq | XP_037405299.1 | 26S proteasome non-ATPase regulatory subunit 14 homolog [Triticum dicoccoides] | 0 |
| Q9LT08 | 26S proteasome non-ATPase regulatory subunit 14 homolog OS=Arabidopsis thaliana OX=3702 GN=RPN11 PE=1 SV=1 | 0 | |
| TrEMBL | G0Z6F1 | 26s proteasome non-ATPase regulatory subunit OS=Triticum aestivum OX=4565 GN=TRAES_3BF102700120CFD_c1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG025520.