Basic Information
Locus ID:
gene:TRIDC3AG025380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 217750439 | 217751735 | - | gene:TRIDC3AG025380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 21,168.94 Da | 48.42 | 96.17 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 104 | 147 | 8.5E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 104 | 153 | 1.65E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 152 | 8.1E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 105 | 146 | 6.9E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 105 | 147 | 12.563043 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15100.1 | RING-H2 finger A2A. Encodes a putative RING-H2 finger protein RHA2a. | 0 |
| RefSeq | XP_037409205.1 | E3 ubiquitin-protein ligase RNF13-like [Triticum dicoccoides] | 0 |
| Q9ZT50 | E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EEL4 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG025380.