Basic Information
Locus ID:
gene:TRIDC3AG021380
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 159781923 | 159833949 | - | gene:TRIDC3AG021380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.33 | 49,222.51 Da | 39.13 | 89.86 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 190 | 316 | 4.70547E-36 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 192 | 316 | 6.3E-25 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 168 | 351 | 1.44E-42 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 150 | 421 | 6.1E-81 | IPR016135 |
| SMART | SM00212 | ubc_7 | 190 | 342 | 5.0E-25 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 187 | 347 | 35.647572 | IPR000608 |
| Coils | Coil | Coil | 407 | 427 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33770.1 | phosphate 2. Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response. | 0 |
| RefSeq | XP_037405035.1 | putative ubiquitin-conjugating enzyme E2 38 isoform X2 [Triticum dicoccoides] | 0 |
| Q8VY10 | Probable ubiquitin-conjugating enzyme E2 24 OS=Arabidopsis thaliana OX=3702 GN=UBC24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7PRQ8 | UBC core domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG021380.