Basic Information
Locus ID:
gene:TRIDC3AG021240
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 157064705 | 157069366 | + | gene:TRIDC3AG021240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.85 | 53,780.67 Da | 52.40 | 60.35 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 202 | 353 | 2.60357E-38 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 203 | 349 | 4.9E-24 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 180 | 367 | 2.17E-44 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 164 | 436 | 1.2E-87 | IPR016135 |
| SMART | SM00212 | ubc_7 | 202 | 359 | 4.5E-26 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 199 | 359 | 37.45718 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 411 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 27 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53025.1 | Ubiquitin-conjugating enzyme family protein. | 0 |
| RefSeq | XP_037405023.1 | putative ubiquitin-conjugating enzyme E2 38 [Triticum dicoccoides] | 0 |
| Q8GY87 | Probable ubiquitin-conjugating enzyme E2 26 OS=Arabidopsis thaliana OX=3702 GN=UBC26 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6EFP3 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG021240.