Basic Information
Locus ID:
gene:TRIDC3AG018440
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-H2 zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 124592973 | 124593861 | - | gene:TRIDC3AG018440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.66 | 22,823.56 Da | 51.20 | 75.78 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 113 | 156 | 1.08339E-17 | - |
| Pfam | PF13639 | Ring finger domain | 113 | 156 | 3.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 111 | 163 | 5.18E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 89 | 163 | 9.6E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 114 | 155 | 4.5E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 114 | 156 | 10.895954 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 189 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47560.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037409127.1 | E3 ubiquitin-protein ligase EL5-like [Triticum dicoccoides] | 0 |
| O22255 | RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6ED47 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG018440.