Basic Information
Locus ID:
gene:TRIDC3AG018430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 124517698 | 124518324 | - | gene:TRIDC3AG018430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 23,016.31 Da | 52.63 | 77.56 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 127 | 170 | 5.9E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 118 | 178 | 3.53E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 92 | 176 | 1.7E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 128 | 169 | 2.3E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 128 | 170 | 12.179465 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 209 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35000.1 | RING/U-box superfamily protein. E3 ligase-like protein induced by chitin oligomers. | 0 |
| RefSeq | XP_037409125.1 | RING-H2 finger protein ATL39-like [Triticum dicoccoides] | 0 |
| O64763 | E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana OX=3702 GN=ATL9 PE=1 SV=1 | 0 | |
| TrEMBL | M8AK90 | E3 ubiquitin-protein ligase ATL9 OS=Triticum urartu OX=4572 GN=TRIUR3_32022 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG018430.