Basic Information
Locus ID:
gene:TRIDC3AG017670
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 117512661 | 117517029 | + | gene:TRIDC3AG017670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 37,424.73 Da | 33.65 | 81.36 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 256 | 292 | 1.7E-4 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 6 | 343 | 3.11E-31 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 165 | 345 | 1.8E-14 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 3 | 164 | 2.7E-21 | IPR015943 |
| SMART | SM00320 | WD40_4 | 250 | 292 | 7.4E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 17 | 56 | 170.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 103 | 144 | 0.034 | IPR001680 |
| SMART | SM00320 | WD40_4 | 304 | 343 | 12.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 62 | 100 | 0.54 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 257 | 292 | 13.014815 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 111 | 153 | 8.536777 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 257 | 292 | 10.811958 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45760.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037404777.1 | WD repeat-containing protein 53-like isoform X1 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6EDY0 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG017670.