Basic Information
Locus ID:
gene:TRIDC3AG016500
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 104121992 | 104124703 | - | gene:TRIDC3AG016500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 95,153.84 Da | 44.90 | 88.33 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 546 | 808 | 8.59517E-91 | - |
| Pfam | PF12819 | Malectin-like domain | 83 | 410 | 2.3E-17 | IPR024788 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 546 | 809 | 1.7E-40 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 521 | 814 | 3.24E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 616 | 824 | 1.2E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 509 | 615 | 3.3E-34 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 28 | 199 | 6.2E-14 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 223 | 412 | 3.4E-21 | - |
| SMART | SM00220 | serkin_6 | 540 | 814 | 4.0E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 540 | 814 | 35.4813 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 546 | 568 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 661 | 673 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 836 | 866 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46290.1 | hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. | 0 |
| RefSeq | XP_037404699.1 | receptor-like protein kinase HERK 1 [Triticum dicoccoides] | 0 |
| Q9LX66 | Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EKA6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG016500.