Basic Information
Locus ID:
gene:TRIDC3AG015320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
UBP14
Description:
ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 94117750 | 94127398 | - | gene:TRIDC3AG015320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 88,586.77 Da | 40.27 | 75.70 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14294 | UBA1_UBP5_like | 610 | 653 | 1.27795E-14 | - |
| CDD | cd02658 | Peptidase_C19B | 311 | 791 | 1.28242E-131 | - |
| Pfam | PF00627 | UBA/TS-N domain | 669 | 704 | 9.6E-12 | IPR015940 |
| Pfam | PF02148 | Zn-finger in ubiquitin-hydrolases and other protein | 182 | 255 | 6.9E-17 | IPR001607 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 310 | 790 | 8.2E-44 | IPR001394 |
| Pfam | PF17807 | Variant UBP zinc finger | 11 | 74 | 6.2E-23 | IPR041432 |
| SUPERFAMILY | SSF57850 | RING/U-box | 160 | 268 | 1.29E-33 | - |
| SUPERFAMILY | SSF46934 | UBA-like | 657 | 710 | 1.09E-11 | IPR009060 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 305 | 793 | 1.06E-78 | IPR038765 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 153 | 255 | 6.8E-38 | IPR013083 |
| Gene3D | G3DSA:1.10.8.10 | - | 665 | 723 | 1.2E-16 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 303 | 795 | 1.3E-78 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 98 | 1.3E-32 | IPR013083 |
| Gene3D | G3DSA:1.10.8.10 | - | 589 | 663 | 1.2E-13 | - |
| SMART | SM00290 | Zf_UBP_1 | 181 | 236 | 1.7E-21 | IPR001607 |
| SMART | SM00165 | uba_6 | 609 | 647 | 0.015 | IPR015940 |
| SMART | SM00165 | uba_6 | 670 | 707 | 1.0E-8 | IPR015940 |
| PIRSF | PIRSF016308 | UBP | 3 | 794 | 1.7E-272 | IPR016652 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 668 | 708 | 14.426468 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 607 | 648 | 9.486562 | IPR015940 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 180 | 254 | 18.344563 | IPR001607 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 310 | 793 | 41.862831 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 311 | 326 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 738 | 756 | - | IPR018200 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20630.1 | ubiquitin-specific protease 14. Encodes a ubiquitin-specific protease. Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage. Also involved in root responses to phosphate deficiency. | 0 |
| RefSeq | XP_037404609.1 | ubiquitin carboxyl-terminal hydrolase 14-like [Triticum dicoccoides] | 0 |
| Q8L6Y1 | Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana OX=3702 GN=UBP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EDF0 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG015320.