Basic Information
Locus ID:
gene:TRIDC3AG013750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 74258081 | 74265301 | - | gene:TRIDC3AG013750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 53,610.07 Da | 42.43 | 87.02 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 188 | 226 | 3.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 237 | 273 | 4.2E-4 | IPR001680 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 81 | 5.45E-9 | IPR036047 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 134 | 445 | 1.71E-32 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 284 | 461 | 1.2E-12 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 115 | 283 | 1.4E-21 | IPR015943 |
| SMART | SM00320 | WD40_4 | 233 | 273 | 2.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 184 | 226 | 2.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 322 | 360 | 40.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 131 | 183 | 5.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 364 | 404 | 32.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 240 | 273 | 10.575287 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 190 | 235 | 8.637032 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 240 | 273 | 8.887423 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037404503.1 | guanine nucleotide-binding protein subunit beta-like protein [Triticum dicoccoides] | 0 |
| TrEMBL | A0A8R7PNL2 | WD_REPEATS_REGION domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG013750.