Basic Information
Locus ID:
gene:TRIDC3AG012580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 62268742 | 62272755 | - | gene:TRIDC3AG012580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.44 | 63,203.67 Da | 54.23 | 65.07 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 542 | 584 | 5.5E-11 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 533 | 585 | 1.02E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 508 | 588 | 6.0E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 543 | 583 | 2.4E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 543 | 584 | 12.754832 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37150.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037409484.1 | probable E3 ubiquitin-protein ligase HIP1 [Triticum dicoccoides] | 0 |
| Q7XTV7 | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza sativa subsp. japonica OX=39947 GN=HIP1 PE=1 SV=2 | 0 | |
| TrEMBL | M8A737 | E3 ubiquitin ligase BIG BROTHER-related protein OS=Triticum urartu OX=4572 GN=TRIUR3_33739 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG012580.