Basic Information
Locus ID:
gene:TRIDC3AG009430
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 47836348 | 47847399 | + | gene:TRIDC3AG009430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 73,762.76 Da | 51.99 | 74.46 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00240 | Ubiquitin family | 26 | 96 | 8.4E-17 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 19 | 100 | 6.45E-22 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 16 | 120 | 2.3E-25 | - |
| SMART | SM00213 | ubq_7 | 24 | 95 | 8.2E-19 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 24 | 99 | 20.478973 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 702 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 678 | 702 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 661 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 587 | 606 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 263 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25270.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_037404192.1 | ubiquitin-like domain-containing protein CIP73 isoform X1 [Triticum dicoccoides] | 0 |
| D5LXJ0 | Ubiquitin-like domain-containing protein CIP73 OS=Lotus japonicus OX=34305 GN=CIP73 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6EEI9 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG009430.