Basic Information
Locus ID:
gene:TRIDC3AG006370
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
DDB2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 30708111 | 30713957 | + | gene:TRIDC3AG006370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.95 | 60,035.99 Da | 35.25 | 70.29 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 154 | 186 | 0.11 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 154 | 485 | 5.04E-36 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 152 | 481 | 7.0E-88 | IPR015943 |
| Gene3D | G3DSA:4.10.60.10 | - | 58 | 105 | 3.1E-5 | - |
| SMART | SM00320 | WD40_4 | 333 | 372 | 0.004 | IPR001680 |
| SMART | SM00320 | WD40_4 | 445 | 477 | 58.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 288 | 327 | 0.42 | IPR001680 |
| SMART | SM00320 | WD40_4 | 189 | 230 | 6.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 146 | 186 | 0.0037 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 339 | 372 | 9.338814 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 153 | 186 | 9.873505 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 545 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 545 | - | - |
| Coils | Coil | Coil | 15 | 35 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58760.1 | damaged DNA binding 2. Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity. | 0 |
| RefSeq | XP_037404030.1 | DNA damage-binding protein 2-like [Triticum dicoccoides] | 0 |
| Q84KJ3 | DNA damage-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DDB2 PE=1 SV=1 | 0 | |
| TrEMBL | M7ZBV7 | Protein DAMAGED DNA-BINDING 2 OS=Triticum urartu OX=4572 GN=TRIUR3_09514 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG006370.