Basic Information
Locus ID:
gene:TRIDC3AG005370
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 24413611 | 24419791 | - | gene:TRIDC3AG005370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.51 | 121,357.31 Da | 41.36 | 72.03 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 847 | 975 | 4.88512E-31 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 850 | 985 | 1.9E-21 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 828 | 1013 | 2.17E-38 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 813 | 1074 | 1.0E-76 | IPR016135 |
| SMART | SM00212 | ubc_7 | 848 | 1012 | 2.6E-17 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 845 | 1005 | 31.291977 | IPR000608 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 751 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 787 | 802 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 57 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 786 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 594 | 624 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 397 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16920.1 | ubiquitin-conjugating enzyme 23. | 0 |
| RefSeq | XP_037403997.1 | probable ubiquitin-conjugating enzyme E2 23 isoform X1 [Triticum dicoccoides] | 0 |
| Q9ZVX1 | Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana OX=3702 GN=UBC23 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7TR02 | UBC core domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG005370.