Basic Information
Locus ID:
gene:TRIDC3AG004390
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
callose synthase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 20117659 | 20140665 | - | gene:TRIDC3AG004390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 77,384.30 Da | 42.96 | 89.57 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04652 | Vta1 like | 25 | 152 | 2.2E-9 | IPR039431 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 564 | 667 | 5.4E-14 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 263 | 533 | 1.6E-47 | IPR000719 |
| SUPERFAMILY | SSF49354 | PapD-like | 562 | 672 | 4.45E-19 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 248 | 536 | 1.18E-66 | IPR011009 |
| Gene3D | G3DSA:1.25.40.270 | - | 8 | 167 | 8.9E-29 | IPR023175 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 560 | 680 | 4.6E-24 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 242 | 332 | 1.3E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 358 | 551 | 1.2E-49 | - |
| SMART | SM00220 | serkin_6 | 262 | 533 | 3.8E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 262 | 553 | 35.467167 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 563 | 680 | 16.766874 | IPR000535 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 268 | 290 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 399 | 411 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05570.2 | callose synthase 1. Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48. | 0 |
| RefSeq | XP_037403947.1 | dual specificity protein kinase shkB-like [Triticum dicoccoides] | 0 |
| Q9AUE0 | Callose synthase 1 OS=Arabidopsis thaliana OX=3702 GN=CALS1 PE=1 SV=2 | 0 | |
| TrEMBL | M7YQB9 | Callose synthase 2 OS=Triticum urartu OX=4572 GN=TRIUR3_04664 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG004390.