Basic Information
Locus ID:
gene:TRIDC3AG001450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 5197156 | 5199380 | + | gene:TRIDC3AG001450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 74,777.22 Da | 30.79 | 93.92 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 372 | 640 | 1.39657E-91 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 23 | 273 | 1.96529E-76 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 24 | 282 | 1.9E-58 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 367 | 569 | 2.2E-45 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 23 | 276 | 1.87E-56 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 638 | 7.32E-76 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 21 | 281 | 6.9E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 442 | 1.1E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 443 | 653 | 3.6E-52 | - |
| SMART | SM00220 | serkin_6 | 366 | 638 | 3.1E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 647 | 36.838165 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 488 | 500 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 372 | 395 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037403786.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | W5CJ26 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG001450.