Basic Information
Locus ID:
gene:TRIDC3AG001300
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 4597872 | 4605713 | + | gene:TRIDC3AG001300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 78,501.60 Da | 50.22 | 79.45 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 66 | 129 | 8.2E-13 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 381 | 647 | 3.3E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 651 | 5.06E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 455 | 662 | 2.5E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 355 | 454 | 9.7E-24 | - |
| SMART | SM00220 | serkin_6 | 378 | 650 | 1.1E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 378 | 665 | 37.615532 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 384 | 407 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 498 | 510 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66920.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_037403803.1 | rust resistance kinase Lr10-like isoform X1 [Triticum dicoccoides] | 0 |
| P93604 | Rust resistance kinase Lr10 OS=Triticum aestivum OX=4565 GN=LRK10 PE=2 SV=1 | 0 | |
| TrEMBL | W8VY23 | non-specific serine/threonine protein kinase OS=Hordeum vulgare OX=4513 GN=IdiRLK2 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG001300.