Basic Information
Locus ID:
gene:TRIDC3AG000540
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Protein of unknown function (DUF3675)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 3A | 2365115 | 2367542 | + | gene:TRIDC3AG000540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 30,915.95 Da | 55.45 | 81.87 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 56 | 101 | 9.59646E-18 | - |
| Pfam | PF12906 | RING-variant domain | 56 | 101 | 2.6E-12 | IPR011016 |
| Pfam | PF12428 | Protein of unknown function (DUF3675) | 107 | 220 | 1.5E-38 | IPR022143 |
| SUPERFAMILY | SSF57850 | RING/U-box | 53 | 106 | 6.36E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 45 | 111 | 6.2E-19 | IPR013083 |
| SMART | SM00744 | ringv_2 | 55 | 102 | 1.4E-18 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 48 | 108 | 21.688087 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 273 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01275.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_037403853.1 | uncharacterized protein LOC119266701 isoform X2 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6EA37 | RING-CH-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC3AG000540.