Basic Information
Locus ID:
gene:TRIDC2BG090870
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
CAP_GLY
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 800037500 | 800045282 | + | gene:TRIDC2BG090870 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 28,486.69 Da | 29.46 | 75.73 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01789 | Ubl_TBCB | 31 | 110 | 1.06233E-29 | - |
| Pfam | PF01302 | CAP-Gly domain | 177 | 243 | 5.6E-22 | IPR000938 |
| Pfam | PF14560 | Ubiquitin-like domain | 31 | 115 | 4.3E-26 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 26 | 118 | 4.78E-19 | IPR029071 |
| SUPERFAMILY | SSF74924 | Cap-Gly domain | 120 | 247 | 1.26E-35 | IPR036859 |
| Gene3D | G3DSA:2.30.30.190 | - | 164 | 255 | 7.3E-29 | IPR036859 |
| Gene3D | G3DSA:3.10.20.90 | - | 30 | 114 | 4.3E-28 | - |
| SMART | SM01052 | CAP_GLY_2 | 177 | 244 | 9.2E-27 | IPR000938 |
| ProSiteProfiles | PS50245 | CAP-Gly domain profile. | 197 | 239 | 15.477582 | IPR000938 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10220.1 | tubulin folding cofactor B. Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division. | 0 |
| RefSeq | XP_037488303.1 | tubulin-folding cofactor B-like [Triticum dicoccoides] | 0 |
| Q67Z52 | Tubulin-folding cofactor B OS=Arabidopsis thaliana OX=3702 GN=TFCB PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6CJL0 | CAP-Gly domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG090870.