Basic Information
Locus ID:
gene:TRIDC2BG087600
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 787013833 | 787017684 | + | gene:TRIDC2BG087600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 101,538.86 Da | 43.95 | 87.84 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 596 | 869 | 1.10748E-85 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 322 | 379 | 2.8E-7 | IPR025287 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 30 | 69 | 1.5E-8 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 591 | 862 | 6.1E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 573 | 866 | 1.16E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 666 | 881 | 3.5E-52 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 418 | 509 | 2.6E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 555 | 665 | 2.0E-31 | - |
| SMART | SM00220 | serkin_6 | 590 | 869 | 4.6E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 590 | 869 | 37.855812 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 717 | 729 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 596 | 619 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 471 | 496 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21210.1 | wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development | 0 |
| RefSeq | XP_037488127.1 | wall-associated receptor kinase-like 8 isoform X1 [Triticum dicoccoides] | 0 |
| Q9LMN6 | Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 | 0 | |
| TrEMBL | M7ZGA4 | Wall-associated receptor kinase 4 OS=Triticum urartu OX=4572 GN=TRIUR3_18440 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG087600.