Basic Information
Locus ID:
gene:TRIDC2BG085010
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
negative regulation of inclusion body assembly
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 773004736 | 773031091 | - | gene:TRIDC2BG085010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 531,703.75 Da | 46.56 | 94.25 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 4704 | 4744 | 1.7E-9 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 4704 | 4745 | 2.31E-8 | - |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 31 | 140 | 7.74E-14 | IPR036890 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 1398 | 1575 | 5.59E-13 | IPR036890 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 4681 | 4750 | 4.1E-14 | IPR013083 |
| Gene3D | G3DSA:3.30.565.10 | - | 21 | 181 | 9.9E-6 | IPR036890 |
| SMART | SM00184 | ring_2 | 4705 | 4738 | 8.1E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 4705 | 4739 | 11.869652 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 4598 | 4627 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G23110.1 | Zinc finger, C3HC4 type (RING finger) family protein. | 0 |
| RefSeq | XP_037487984.1 | sacsin-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9JLC8 | Sacsin OS=Mus musculus OX=10090 GN=Sacs PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6CGA3 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG085010.