Basic Information
Locus ID:
gene:TRIDC2BG083640
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 764681524 | 764725279 | + | gene:TRIDC2BG083640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 93,422.19 Da | 44.12 | 85.34 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 35 | 167 | 1.01165E-32 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 549 | 815 | 7.61015E-92 | - |
| CDD | cd01098 | PAN_AP_plant | 350 | 436 | 6.60681E-25 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 546 | 814 | 5.2E-48 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 225 | 332 | 1.2E-26 | IPR000858 |
| Pfam | PF08276 | PAN-like domain | 354 | 421 | 8.5E-22 | IPR003609 |
| Pfam | PF01453 | D-mannose binding lectin | 79 | 193 | 1.8E-31 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 80 | 198 | 9.95E-25 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 526 | 815 | 5.4E-81 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 24 | 164 | 7.8E-18 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 619 | 825 | 3.6E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 513 | 618 | 1.1E-37 | - |
| SMART | SM00473 | ntp_6 | 355 | 435 | 6.9E-8 | IPR003609 |
| SMART | SM00220 | serkin_6 | 543 | 817 | 9.4E-31 | IPR000719 |
| SMART | SM00108 | blect_4 | 35 | 167 | 3.3E-30 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 5 | 856 | 4.0E-277 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 29 | 156 | 18.143898 | IPR001480 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 299 | 335 | 9.463349 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 543 | 822 | 38.265697 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 354 | 436 | 10.206494 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 664 | 676 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 823 | 856 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 830 | 856 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21380.1 | receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels. | 0 |
| RefSeq | XP_037487903.1 | receptor-like serine/threonine-protein kinase SD1-8 isoform X1 [Triticum dicoccoides] | 0 |
| O81905 | Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6CIE0 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG083640.