Basic Information
Locus ID:
gene:TRIDC2BG083480
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 763899358 | 763901757 | - | gene:TRIDC2BG083480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 72,410.27 Da | 48.29 | 80.59 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 46 | 160 | 6.60586E-21 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 347 | 432 | 2.27699E-18 | - |
| Pfam | PF01453 | D-mannose binding lectin | 84 | 186 | 1.1E-27 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 361 | 419 | 7.5E-14 | IPR003609 |
| Pfam | PF00069 | Protein kinase domain | 501 | 630 | 4.5E-25 | IPR000719 |
| Pfam | PF00954 | S-locus glycoprotein domain | 220 | 327 | 1.3E-22 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 482 | 629 | 1.11E-41 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 71 | 225 | 1.7E-23 | IPR036426 |
| Gene3D | G3DSA:2.90.10.10 | - | 26 | 158 | 4.1E-18 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 468 | 572 | 7.2E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 634 | 1.1E-16 | - |
| SMART | SM00220 | serkin_6 | 498 | 656 | 7.2E-6 | IPR000719 |
| SMART | SM00108 | blect_4 | 31 | 160 | 6.7E-25 | IPR001480 |
| SMART | SM00473 | ntp_6 | 360 | 431 | 0.002 | IPR003609 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 31 | 153 | 15.381798 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 351 | 432 | 10.115568 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 498 | 658 | 21.672382 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 617 | 629 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 504 | 526 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19130.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_044459634.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Triticum aestivum] | 0 |
| O64477 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana OX=3702 GN=At2g19130 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6B7V1 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG083480.