Basic Information
Locus ID:
gene:TRIDC2BG081800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
PAN-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 755219577 | 755223613 | + | gene:TRIDC2BG081800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 90,925.62 Da | 38.88 | 86.86 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 506 | 773 | 3.62306E-92 | - |
| CDD | cd00028 | B_lectin | 36 | 149 | 1.29172E-26 | IPR001480 |
| CDD | cd01098 | PAN_AP_plant | 333 | 419 | 8.00155E-22 | - |
| Pfam | PF01453 | D-mannose binding lectin | 71 | 175 | 1.2E-27 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 505 | 731 | 1.2E-46 | IPR001245 |
| Pfam | PF08276 | PAN-like domain | 335 | 403 | 5.2E-16 | IPR003609 |
| Pfam | PF00954 | S-locus glycoprotein domain | 213 | 317 | 4.4E-22 | IPR000858 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 72 | 180 | 1.24E-21 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 483 | 789 | 4.72E-81 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 17 | 146 | 8.6E-15 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 576 | 778 | 3.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 459 | 575 | 7.2E-37 | - |
| SMART | SM00473 | ntp_6 | 336 | 418 | 3.3E-7 | IPR003609 |
| SMART | SM00220 | serkin_6 | 500 | 744 | 6.0E-29 | IPR000719 |
| SMART | SM00108 | blect_4 | 27 | 149 | 1.0E-23 | IPR001480 |
| PIRSF | PIRSF000641 | SRK | 1 | 815 | 2.8E-265 | IPR024171 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 500 | 786 | 36.96537 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 21 | 147 | 17.338285 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 335 | 419 | 10.287319 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 621 | 633 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 506 | 528 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21390.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_037487802.1 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Triticum dicoccoides] | 0 |
| O81906 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6DN47 | Receptor-like serine/threonine-protein kinase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG081800.