Basic Information
Locus ID:
gene:TRIDC2BG078960
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 741323199 | 741329223 | - | gene:TRIDC2BG078960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.77 | 61,922.05 Da | 43.08 | 88.31 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF46934 | UBA-like | 277 | 342 | 4.18E-11 | IPR009060 |
| SUPERFAMILY | SSF46934 | UBA-like | 368 | 414 | 4.88E-7 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 349 | 417 | 2.3E-5 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 304 | 343 | 7.1E-9 | - |
| SMART | SM00165 | uba_6 | 376 | 413 | 0.17 | IPR015940 |
| SMART | SM00165 | uba_6 | 304 | 341 | 6.6E-5 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 302 | 342 | 11.00468 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 374 | 414 | 10.426349 | IPR015940 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 35 | 84 | 10.396963 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 525 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G12550.1 | ubiquitin-associated (UBA)/TS-N domain-containing protein. | 0 |
| RefSeq | XP_037487686.1 | NEDD8 ultimate buster 1-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6CF30 | NEDD8 ultimate buster 1 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG078960.