Basic Information
Locus ID:
gene:TRIDC2BG078660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 2B | 739469615 | 739472606 | + | gene:TRIDC2BG078660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 44,092.35 Da | 57.99 | 68.80 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 3 | 367 | 1.3E-55 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 1 | 369 | 4.71E-91 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 1 | 375 | 1.6E-101 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 3 | 370 | 57.312664 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 4 | 19 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10790.2 | - | 0 |
| RefSeq | XP_037482492.1 | ubiquitin C-terminal hydrolase 22-like, partial [Triticum dicoccoides] | 0 |
| Q9LEW0 | Ubiquitin C-terminal hydrolase 22 OS=Arabidopsis thaliana OX=3702 GN=UBP22 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453D8I6 | USP domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC2BG078660.